Rui Carlos Vaqueiro De Castro Alves

Alves, Rui; Sorribas, Albert

In silico pathway reconstruction: Iron-sulfur cluster biogenesis in Saccharomyces cerevisiae.

BMC SYSTEMS BIOLOGY 1 10-10. 31/01/2007.

[doi:10.1186/1752-0509-1-10]

Alves, R; Antunes, F; Salvador, A

Tools for kinetic modeling of biochemical networks.

Nature Biotechnology 24 667-672. 01/06/2006.

[doi:10.1038/nbt0606-667]

Vilaprinyo, Ester; Alves, Rui; Sorribas, Albert

Use of physiological constraints to identify quantitative design principles for gene expression in yeast adaptation to heat shock.

Bmc Bioinformatics 7 184-184. 03/04/2006.

[doi:10.1186/1471-2105-7-184]

Alves, R; Savageau, MA

Evidence of selection for low cognate amino acid bias in amino acid biosynthetic enzymes

MOLECULAR MICROBIOLOGY 56 1017-1034. 01/05/2005.

[doi:10.1111/j.1365-2958.2005.04566.x]

Alves, R; Herrero, E; SORRIBAS, A

Predictive reconstruction of the mitochondrial iron-sulfur cluster assembly metabolism. II. Role of glutaredoxin Grx5.

PROTEINS 57 481-492. 15/11/2004.

[doi:10.1002/prot.20228]

Alves, R; Herrero, E; SORRIBAS, A

Predictive reconstruction of the mitochondrial iron-sulfur cluster assembly metabolism: I. The role of the protein pair ferredoxin-ferredoxin reductase (Yah1-Arh1).

PROTEINS 56 354-366. 01/08/2004.

[doi:10.1002/prot.20110]

Vilella, F; Alves, R; Rodriguez-Manzaneque, MT; Belli, G; Swaminathan, S; Sunnerhagen, P; Herrero, E

Evolution and cellular function of monothiol glutaredoxins: involvement in iron-sulphur cluster assembly.

Comparative And Functional Genomics 5 328-341. 01/06/2004.

[doi:10.1002/cfg.406]

Alves, R; Savageau, MA

Comparative analysis of prototype two-component systems with either bifunctional or monofunctional sensors: differences in molecular structure and physiological function

MOLECULAR MICROBIOLOGY 48 25-51. 01/04/2003.

[doi:10.1046/j.1365-2958.2003.03344.x]

Alves, R; Chaleil, RAG; Sternberg, MJE

Evolution of enzymes in metabolism: a network perspective

Journal Of Molecular Biology 320 751-770. 19/07/2002.

[doi:10.1016/S0022-2836(02)00546-6]

Alves, R; Savageau, MA

Irreversibility in unbranched pathways: Preferred positions based on regulatory considerations

BIOPHYSICAL JOURNAL 80 1174-1185. 01/03/2001.

Alves, R; Savageau, MA

Effect of overall feedback inhibition in unbranched biosynthetic pathways

BIOPHYSICAL JOURNAL 79 2290-2304. 01/11/2000.

Alves, R; Savageau, MA

Extending the method of mathematically controlled comparison to include numerical comparisons

Bioinformatics 16 786-798. 01/09/2000.

[doi:10.1093/bioinformatics/16.9.786]